Publications

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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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2019
Siddiqui AM, Akhtar J, S SUddin M, Khan MIrfan, Khalid M.  2019.  Molecular mechanism of interactions between Chrysin and I-kappa-B kinase epsilon (IKKe)/Tank Binding Kinase-1(TBK1): Cell based assay and insilico molecular docking studies [High Throughput Screening Facility].. J Biomol Struct Dyn. :1-9.
Das S, Kumar P, Verma A, Maiti TK, Mathew SJ.  2019.  Myosin heavy chain mutations that cause Freeman-Sheldon syndrome lead to muscle structural and functional defects in Drosophila. [Transgenic Fly Facility]. Dev Biol. 449(2)
Gowda M, Sheetal A, Kole C.  2019.  The Neem Genome [Next Gen Genomics Facility].
Tikas G.D, Saiyed T., Katte A..  2019.  Overcoming Barriers in Commercializing Bio-Tech Innovations in India: A Case of Center for Cellular and Molecular Platforms. 2019 Portland International Conference on Management of Engineering and Technology (PICMET).
Valmiki RRamanna, Venkatesalu S, Chacko AGeorge, Prabhu K, Thomas MMary, Mathew V, Yoganathan S, Muthusamy K, Chacko G, Vanjare HArvind et al..  2019.  Phosphoproteomic analysis reveals Akt isoform-specific regulation of cytoskeleton proteins in human temporal lobe epilepsy with hippocampal sclerosis [Mass Spectrometry - Proteomics]. Neurochem Int. :104654.
Mary B, Maurya S, Arumugam S, Kumar V, Jayandharan GR.  2019.  Post-translational modifications in capsid proteins of recombinant adeno-associated virus (AAV) 1-rh10 serotypes [Mass Spectrometry Facility - Proteomics & Glycomics].. FEBS J.
Arora A, Patil V, Kundu P, Kondaiah P, Hegde AS, Arivazhagan A, Santosh V, Pal D, Somasundaram K.  2019.  Serum biomarkers identification by iTRAQ and verification by MRM: S100A8/S100A9 levels predict tumor-stroma involvement and prognosis in Glioblastoma [Mass Spectrometry - Metabolomics Facility].. Sci Rep. 9(1):2749.
Arora A, Patil V, Kundu P, Kondaiah P, Hegde AS, Arivazhagan A, Santosh V, Pal D, Somasundaram K.  2019.  Serum biomarkers identification by iTRAQ and verification by MRM: S100A8/S100A9 levels predict tumor-stroma involvement and prognosis in Glioblastoma [Mass Spectrometry - Metabolomics Facility].. Sci Rep. 9(1):2749.
Chaplot K, Pimpale L, Ramalingam B, Deivasigamani S, Kamat SS, Ratnaparkhi GS.  2019.  SOD1 activity threshold and TOR signalling modulate VAP(P58S) aggregation via reactive oxygen species-induced proteasomal degradation in a model of amyotrophic lateral sclerosis. [High Throughput Screening Facility]. Dis Model Mech. 12(2)
Ganesan S, Palani HKumar, Lakshmanan V, Balasundaram N, Alex AAbu, David S, Venkatraman A, Korula A, George B, Balasubramanian P et al..  2019.  Stromal cells downregulate miR-23a-5p to activate protective autophagy in acute myeloid leukemia [Next Gen Genomics Facility (INT)].. Cell Death Dis. 10(10):736.
Kumari J, Vinnakota R, Kumar J.  2019.  Structural and Functional Insights into GluK3-kainate Receptor Desensitization and Recovery [National Cryo-Electron Microscopy Facility]. Sci Rep. 9(1):10254.
Kumari J, Vinnakota R, Kumar J.  2019.  Structural and Functional Insights into GluK3-kainate Receptor Desensitization and Recovery [National Cryo-Electron Microscopy Facility]. Sci Rep. 9(1):10254.
Pasha SNaseer, K Shafi M, Joshi AG, Meenakshi I, Harini K, Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2019.  The transcriptome enables the identification of candidate genes behind medicinal value of Drumstick tree (Moringa oleifera) [Next Gen Genomics Facility (INT)].. Genomics.
Somani D, Adhav R, Prashant R, Kadoo NY.  2019.  Transcriptomics analysis of propiconazole-treated Cochliobolus sativus reveals new putative azole targets in the plant pathogen [Next Gen Genomics Facility].. Funct Integr Genomics.
2018
Bairy S, Gopalan LNarayanan, Setty TGangi, Srinivasachari S, Manjunath L, Kumar JPrakash, Guntupalli SR, Bose S, Nayak V, Ghosh S et al..  2018.  Automation aided optimization of cloning, expression and purification of enzymes of the bacterial sialic acid catabolic and sialylation pathways enzymes for structural studies. [Protein Technology (INT)].
Dias M, Pattabiraman C, Siddappa S, Gowda M, Shet A, Smith D, Muehlemann B, Tamma K, Solomon T, Jones T et al..  2018.  Complete assembly of a dengue virus type 3 genome from a recent genotype III clade by metagenomic sequencing of serum.[Next Gen Genomics Facility (INT)]. Wellcome Open Res. 3:44.
Kumar VPradeep, Kolte AP, Dhali A, Naik C, Sridhar M.  2018.  Enhanced delignification of lignocellulosic substrates by Pichia GS115 expressed recombinant laccase. [Mass Spectrometry - Proteomics]. J Gen Appl Microbiol.
Kumar VPradeep, Kolte AP, Dhali A, Naik C, Sridhar M.  2018.  Enhanced delignification of lignocellulosic substrates by Pichia GS115 expressed recombinant laccase. [Mass Spectrometry - Proteomics]. J Gen Appl Microbiol.
Shadrick WR, Slavish PJ, Chai SC, Waddell B, Connelly M, Low JA, Tallant C, Young BM, Bharatham N, Knapp S et al..  2018.  Exploiting a water network to achieve enthalpy-driven, bromodomain-selective BET inhibitors. Bioorganic & Medicinal Chemistry. 26:25-36.
Kalita B, Patra A, Jahan S, Mukherjee AK.  2018.  First report of the characterization of a snake venom apyrase (Ruviapyrase) from Indian Russell's viper (Daboia russelii) venom. [Mass Spectromety Facility - Proteomics]. Int J Biol Macromol. 111:639-648.
Siddiqui A, Badruddeen., Akhtar J, MS SUddin, S C, Khan MIrfan, Khalid M.  2018.  Highly Sensitive LC-MS/MS-ESI method Development for the Determination of 5,7-dihydroxyflavone in Mouse Plasma and Pharmacokinetic Study in Lean and Diet Induced Obese Mice [High Throughput Screening Facility].. Der Pharmacia Lettre. 10(11)
Siddiqui A, Badruddeen., Akhtar J, MS SUddin, S C, Khan MIrfan, Khalid M.  2018.  Highly Sensitive LC-MS/MS-ESI method Development for the Determination of 5,7-dihydroxyflavone in Mouse Plasma and Pharmacokinetic Study in Lean and Diet Induced Obese Mice [High Throughput Screening Facility].. Der Pharmacia Lettre. 10(11)
Lomate PR, Dewangan V, Mahajan N, Kumar Y, Kulkarni A, Wang L, Saxsena S, Gupta VS, Giri AP.  2018.  Integrated transcriptomic and proteomic analyses suggest the participation of endogenous protease inhibitors in the regulation of protease gene expression in [Next Gen Genomics Facility]. Mol Cell Proteomics.
Lomate PR, Dewangan V, Mahajan N, Kumar Y, Kulkarni A, Wang L, Saxsena S, Gupta VS, Giri AP.  2018.  Integrated transcriptomic and proteomic analyses suggest the participation of endogenous protease inhibitors in the regulation of protease gene expression in [Next Gen Genomics Facility]. Mol Cell Proteomics.
Ganaie MY, Qureshi S, Kashoo Z, Wani SA, Hussain MI, Kumar R, Maqbool R, Sikander P, Banday MS, Malla WA et al..  2018.  Isolation and characterization of two lytic bacteriophages against Staphylococcus aureus from India: newer therapeutic agents against Bovine mastitis. [Electron Microscopy Facility]. Vet Res Commun.

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