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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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Author [ Title(Desc)] Type Year
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C
Bana AArunkumar, Sajeev N, Halder S, Masi HAbbas, Patel S, Mehta P.  2023.  Comparative stability study and aggregate analysis of Bevacizumab marketed formulations using advanced analytical techniques [Biologics / Biopharmaceutical Characterization Facility]. Heliyon. 9:e19478.
Dias M, Pattabiraman C, Siddappa S, Gowda M, Shet A, Smith D, Muehlemann B, Tamma K, Solomon T, Jones T et al..  2018.  Complete assembly of a dengue virus type 3 genome from a recent genotype III clade by metagenomic sequencing of serum.[Next Gen Genomics Facility (INT)]. Wellcome Open Res. 3:44.
Kuravadi NA, Yenagi V, Rangiah K, Mahesh HB, Rajamani A, Shirke MD, Russiachand H, Loganathan RMalarini, Lingu CShankara, Siddappa S et al..  2015.  Comprehensive analyses of genomes, transcriptomes and metabolites of neem tree. [Mass spectrometry - Metabolomics]. PeerJ. 3:e1066.
Rangiah K, Palakodeti D.  2013.  Comprehensive analysis of neurotransmitters from regenerating planarian extract using an ultrahigh-performance liquid chromatography/mass spectrometry/selected reaction monitoring method.. Rapid Commun Mass Spectrom. 27(21):2439-52.
Kumar S, Vijayasarathy M, Venkatesha MA, Sunita P, Balaram P.  2020.  Cone snail analogs of the pituitary hormones oxytocin/vasopressin and their carrier protein neurophysin. Proteomic and transcriptomic identification of conopressins and conophysins [Next Gen Genomics Facility (INT)]. Biochim Biophys Acta Proteins Proteom. :140391.
Yadav N., Chauhan M.K., Chauhan V.S..  2021.  Conformationally constrained dipeptide-based hydrogel as a platform for 3D cell growth and tissue engineering applications [Dr. Nitin Yadav, a BIG Funding Grantee/Start-up]. Applied Nanoscience . 34
Yadav N, Kumar U, Chauhan VSingh.  2023.  Conformationally restricted, dipeptide-based, self-assembled nanoparticles for efficient vancomycin delivery. [C-CAMP BIG Grantee/Startup]. Nanomedicine (Lond).
Datta S.  2023.  The conundrum of bacteria-specific antibiotics [Bugworks Research Pvt. Ltd., a C-CAMP Startup]. J Antimicrob Chemother. 78(6):1354-1358.
Hajirnis N, Pandey S, Mishra RK.  2023.  CRISPR/Cas9 and FLP-FRT mediated regulatory dissection of the BX-C of Drosophila melanogaster [Transgenic Fly Facility]. Chromosome Res. 31(1):7.
Nayak SRanjan, Joseph D, Höfner G, Dakua A, Athreya A, Wanner KT, Kanner BI, Penmatsa A.  2023.  Cryo-EM structure of GABA transporter 1 reveals substrate recognition and transport mechanism [National Cryo-Electron Microscopy Facility]. Nat Struct Mol Biol.
Kumar N, Sharma S, Kaushal PS.  2024.  Cryo-EM structure of the mycobacterial 70S ribosome in complex with ribosome hibernation promotion factor RafH [National Cryo-EM Facility, BLiSC]. Nat Commun. 15(1):638.
Srinivasan K, Banerjee A, Sengupta J.  2024.  Cryo-EM structures reveal the molecular mechanism of HflX-mediated erythromycin resistance in mycobacteria [National Cryo-EM Facility, BLiSC]. Structure.
Shanbhag AP, Rajagopal S, Ghatak A, Katagihallimath N, Subramanian R, Datta S.  2023.  A curated list of targeted optimized promiscuous ketoreductases (TOP-K). [Bugworks Research Pvt. Ltd., a C-CAMP Startup]. Biochem J. 480(13):975-997.
D
Nadiya F, Anjali N, Thomas J, Gangaprasad A, Sabu KK.  2017.  Data on identification of conserved and novel miRNAs in Elettaria cardamomum [Next Gen Genomics Facility]. Data Brief. 14:789-792.
K. Shafi M, Joshi AG, Meenakshi I, Pasha SNaseer, Harini K., Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2020.  Dataset for the combined transcriptome assembly of M. oleifera and functional annotation [Next Gen Genomics Facility (INT)]. Data in Brief. :105416.
Neerathilingam M, Bairy SG, Mysore S.  2016.  Deciphering Mode of Action of Functionally Important Regions in the Intrinsically Disordered Paxillin (Residues 1-313) Using Its Interaction with FAT (Focal Adhesion Targeting Domain of Focal Adhesion Kinase). [Protein Technology Core]. PLoS One. 11(2):e0150153.
Kumar R, Mohammad A, Saini RV, Chahal A, Wong C-M, Sharma D, Kaur S, Kumar V, Winterbourn CC, Saini AK.  2019.  Deciphering the in vivo redox behavior of human peroxiredoxins I and II by expressing in budding yeast [Mass Spectrometry - Proteomics].. Free Radic Biol Med. 145:321-329.
Nadiya F, Anjali N, Thomas J, Gangaprasad A, Sabu KK.  2019.  Deep sequencing identified potential miRNAs involved in defence response, stress and plant growth characteristics of wild genotypes of cardamom [Next Gen Genomics Facility]. Plant Biol (Stuttg). 21(1):3-14.
Krishna S, Nair A, Cheedipudi S, Poduval D, Dhawan J, Palakodeti D, Ghanekar Y.  2013.  Deep sequencing reveals unique small RNA repertoire that is regulated during head regeneration in Hydra magnipapillata. [Next Generation Genomics facility]. Nucleic Acids Res. 41(1):599-616.
Shaw AG, Troman C, Akello JOdeke, O'Reilly KM, Gauld J, Grow S, Grassly N, Steele D, Blazes D, Kumar S.  2023.  Defining a research agenda for environmental wastewater surveillance of pathogens.. Nat Med.
Ghatak A, Bharatham N, Shanbhag AP, Datta S, Venkatraman J.  2017.  Delineating Substrate Diversity of Disparate Short-Chain Dehydrogenase Reductase from Debaryomyces hansenii [Bugworks Res. Pvt. Ltd., a C-CAMP Startup]. PLoS One. 12(1):e0170202.
Konala VBhaskar Re, Nandakumar S, Surendran H, Pal R.  2021.  Derivation of Induced Pluripotent Stem Cell (iPSC) Lines from Patient-Specific Peripheral Blood Mononuclear Cells (PBMC) Using Episomal Vectors [Eyestem Research Pvt. Ltd., a C-CAMP Startup]. Methods Mol Biol.
Singh J, Sabareesan AT, Mathew MK, Udgaonkar JB.  2012.  Development of the structural core and of conformational heterogeneity during the conversion of oligomers of the mouse prion protein to worm-like amyloid fibrils.. J Mol Biol. 423(2):217-31.
Gupta S, Marcel N, Talwar S, Garg M, R I, Perumalsamy LR, Sarin A, Shivashankar GV.  2012.  Developmental heterogeneity in DNA packaging patterns influences T-cell activation and transmigration.. PLoS One. 7(9):e43718.
Boya R, Yadavalli ADevi, Nikhat S, Kurukuti S, Palakodeti D, Pongubala JMR.  2017.  Developmentally regulated higher-order chromatin interactions orchestrate B cell fate commitment.. Nucleic Acids Res.

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