Publications

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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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Author Title Type [ Year(Asc)]
2019
Tuikhar N, Keisam S, Labala RKumar, Ramakrishnan P, Arunkumar MCha, Ahmed G, Biagi E, Jeyaram K.  2019.  Comparative analysis of the gut microbiota in centenarians and young adults shows a common signature across genotypically non-related populations [Mass Spectrometry - Metabolomics Facility].. Mech Ageing Dev. 179:23-35.
Nadiya F, Anjali N, Thomas J, Gangaprasad A, Sabu KK.  2019.  Deep sequencing identified potential miRNAs involved in defence response, stress and plant growth characteristics of wild genotypes of cardamom [Next Gen Genomics Facility]. Plant Biol (Stuttg). 21(1):3-14.
Singh R, Chandrashekharappa S, Bodduluri SR, Baby BV, Hegde B, Kotla NG, Hiwale AA, Saiyed T, Patel P, Vijay-Kumar M et al..  2019.  Enhancement of the gut barrier integrity by a microbial metabolite through the Nrf2 pathway [Discovery to Innovation Accelerator]. Nat Commun. 10(1):89.
Maniyadath B, Chattopadhyay T, Verma S, Kumari S, Kulkarni P, Banerjee K, Lazarus A, Kokane SS, Shetty T, Anamika K et al..  2019.  Loss of Hepatic Oscillatory Fed microRNAs Abrogates Refed Transition and Causes Liver Dysfunctions [Next Gen Genomics Facility].. Cell Rep. 26(8):2212-2226.e7.
Siddiqui AM, Akhtar J, S SUddin M, Khan MIrfan, Khalid M.  2019.  Molecular mechanism of interactions between Chrysin and I-kappa-B kinase epsilon (IKKe)/Tank Binding Kinase-1(TBK1): Cell based assay and insilico molecular docking studies [High Throughput Screening Facility].. J Biomol Struct Dyn. :1-9.
Das S, Kumar P, Verma A, Maiti TK, Mathew SJ.  2019.  Myosin heavy chain mutations that cause Freeman-Sheldon syndrome lead to muscle structural and functional defects in Drosophila. [Transgenic Fly Facility]. Dev Biol.
Arora A, Patil V, Kundu P, Kondaiah P, Hegde AS, Arivazhagan A, Santosh V, Pal D, Somasundaram K.  2019.  Serum biomarkers identification by iTRAQ and verification by MRM: S100A8/S100A9 levels predict tumor-stroma involvement and prognosis in Glioblastoma [Mass Spectrometry - Metabolomics Facility].. Sci Rep. 9(1):2749.
Bheri M, Bhosle SM, Makandar R.  2019.  Shotgun proteomics provides an insight into pathogenesis related proteins using anamorphic stage of the biotroph, Erysiphe pisi pathogen of garden pea [Mass Spectrometry Facility - Proteomics]. Microbiological Research.
Chaplot K, Pimpale L, Ramalingam B, Deivasigamani S, Kamat SS, Ratnaparkhi GS.  2019.  SOD1 activity threshold and TOR signalling modulate VAP(P58S) aggregation via reactive oxygen species-induced proteasomal degradation in a model of amyotrophic lateral sclerosis. [High Throughput Screening Facility]. Dis Model Mech. 12(2)
Somani D, Adhav R, Prashant R, Kadoo NY.  2019.  Transcriptomics analysis of propiconazole-treated Cochliobolus sativus reveals new putative azole targets in the plant pathogen [Next Gen Genomics Facility].. Funct Integr Genomics.
2018
Bairy S, Gopalan LNarayanan, Setty TGangi, Srinivasachari S, Manjunath L, Kumar JPrakash, Guntupalli SR, Bose S, Nayak V, Ghosh S et al..  2018.  Automation aided optimization of cloning, expression and purification of enzymes of the bacterial sialic acid catabolic and sialylation pathways enzymes for structural studies. [Protein Technology].
Borah D, Nainamalai S, Gopalakrishnan S, Rout J, Alharbi NS, Alharbi SAli, Nooruddin T.  2018.  Biolubricant potential of exopolysaccharides from the cyanobacterium Cyanothece epiphytica. [Mass Spectrometry - Glycomics]. Appl Microbiol Biotechnol. 102(8):3635-3647.
Jose RC, Bengyella L, Handique PJ, Talukdar NC.  2018.  Cellular and proteomic events associated with localized formation of smut-gall during Zizania latifolia-Ustilago esculenta interaction. [Mass Spectrometry - Proteomics Facility]. Microb Pathog.
Dias M, Pattabiraman C, Siddappa S, Gowda M, Shet A, Smith D, Muehlemann B, Tamma K, Solomon T, Jones T et al..  2018.  Complete assembly of a dengue virus type 3 genome from a recent genotype III clade by metagenomic sequencing of serum.[Next Gen Genomics Facility]. Wellcome Open Res. 3:44.
Kumar VPradeep, Kolte AP, Dhali A, Naik C, Sridhar M.  2018.  Enhanced delignification of lignocellulosic substrates by Pichia GS115 expressed recombinant laccase. [Mass Spectrometry - Proteomics]. J Gen Appl Microbiol.
Shadrick WR, Slavish PJ, Chai SC, Waddell B, Connelly M, Low JA, Tallant C, Young BM, Bharatham N, Knapp S et al..  2018.  Exploiting a water network to achieve enthalpy-driven, bromodomain-selective BET inhibitors. Bioorganic & Medicinal Chemistry. 26:25-36.
Kalita B, Patra A, Jahan S, Mukherjee AK.  2018.  First report of the characterization of a snake venom apyrase (Ruviapyrase) from Indian Russell's viper (Daboia russelii) venom. [Mass Spectromety Facility - Proteomics]. Int J Biol Macromol. 111:639-648.
Solari KA, Ramakrishnan U, Hadly EA.  2018.  Gene expression is implicated in the ability of pikas to occupy Himalayan elevational gradient. [Next Gen Genomics Facility]. PLoS One. 13(12):e0207936.
Nadiya F, Anjali N, Thomas J, , Sabu KK.  2018.  Genome-wide differential expression profiling in wild and cultivar genotypes of cardamom reveals regulation of key pathways in plant growth and development [Next Gen Genomics Facility]. Agri Gene. 8:18-27.
Siddiqui A, Badruddeen., Akhtar J, MS SUddin, S C, Khan MIrfan, Khalid M.  2018.  Highly Sensitive LC-MS/MS-ESI method Development for the Determination of 5,7-dihydroxyflavone in Mouse Plasma and Pharmacokinetic Study in Lean and Diet Induced Obese Mice [High Throughput Screening Facility].. Der Pharmacia Lettre. 10(11)
Sharmila GRamachandr, Halami PMotiram, Venkateswaran G.  2018.  Identification and characterization of a calcium dependent bacillopeptidase from Bacillus subtilis CFR5 with novel kunitz trypsin inhibitor degradation activity. [Mass Spectrometry Facility - Proteomics]. Food Res Int. 103:263-272.
Anjali N., Nadiya F., Thomas J, Sabu K.K.  2018.  Identification and characterization of drought responsive microRNAs and their target genes in cardamom (Elettaria cardamomum Maton) [Next Gen Genomics Facility]. Plant Growth Regulation.
Subramanian SPeruvemba, Babu P, Palakodeti D, Subramanian R.  2018.  Identification of multiple isomeric core chitobiose-modified high-mannose and paucimannose -glycans in the planarian. [Mass Spectrometry Facility - Glycomics]. J Biol Chem. 293(18):6707-6720.
Lomate PR, Dewangan V, Mahajan N, Kumar Y, Kulkarni A, Wang L, Saxsena S, Gupta VS, Giri AP.  2018.  Integrated transcriptomic and proteomic analyses suggest the participation of endogenous protease inhibitors in the regulation of protease gene expression in [Next Gen Genomics Facility]. Mol Cell Proteomics.
Ganaie MY, Qureshi S, Kashoo Z, Wani SA, Hussain MI, Kumar R, Maqbool R, Sikander P, Banday MS, Malla WA et al..  2018.  Isolation and characterization of two lytic bacteriophages against Staphylococcus aureus from India: newer therapeutic agents against Bovine mastitis. [Electron Microscopy Facility]. Vet Res Commun.

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