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COVID-19 Response: Local Logistics     National Effort

Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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Journal Article
Gowrishankar K, Ghosh S, Saha S, C R, Mayor S, Rao M.  2012.  Active remodeling of cortical actin regulates spatiotemporal organization of cell surface molecules.. Cell. 149(6):1353-67.
Singhal AV, Malwal D, Thiyagarajan S, Lahiri I.  2021.  Antimicrobial and antibiofilm activity of GNP-Tannic Acid-Ag nanocomposite and their epoxy-based coatings [Log9 Materials, a C-CAMP startup]. Progress in Organic Coatings. 159:106421.
Purushothaman K, Bhat SKrishna, Singh SAnnapurna, Marathe GKedihithlu, Rao ARao GAppu.  2019.  Aspartic protease from Aspergillus niger: Molecular characterization and interaction with pepstatin A [Mass Spectrometry Facility - Proteomics].. Int J Biol Macromol.
Thakur R, Chattopadhyay P, Mukherjee AK.  2015.  Biochemical and pharmacological characterization of a toxic fraction and its cytotoxin-like component isolated from Russell's viper (Daboia russelii russelii) venom. (Mass Spectrometry). Comp Biochem Physiol C Toxicol Pharmacol. 168:55-65.
Srivastava AKumar, Pandey M, Ghate T, Kumar V, Upadhyay MKumar, Majumdar A, Sanjukta AKumar, Agrawal AKumar, Bose S, Srivastava S et al..  2021.  Chemical intervention for enhancing growth and reducing grain arsenic accumulation in rice [Mass Spectrometry - Metabolomics Facility]. Environ Pollut. 276:116719.
Mukherjee AK, Bhagowati P, Biswa BBahadur, Chanda A, Kalita B.  2017.  A comparative intracellular proteomic profiling of Pseudomonas aeruginosa strain ASP-53 grown on pyrene or glucose as sole source of carbon and identification of some key enzymes of pyrene biodegradation pathway.. J Proteomics. 167:25-35.
Bana AArunkumar, Sajeev N, Halder S, Masi HAbbas, Patel S, Mehta P.  2023.  Comparative stability study and aggregate analysis of Bevacizumab marketed formulations using advanced analytical techniques [Biologics / Biopharmaceutical Characterization Facility]. Heliyon. 9:e19478.
Bana AArunkumar, Sajeev N, Halder S, Masi HAbbas, Patel S, Mehta P.  2023.  Comparative stability study and aggregate analysis of Bevacizumab marketed formulations using advanced analytical techniques [Biologics / Biopharmaceutical Characterization Facility]. Heliyon. 9:e19478.
Dias M, Pattabiraman C, Siddappa S, Gowda M, Shet A, Smith D, Muehlemann B, Tamma K, Solomon T, Jones T et al..  2018.  Complete assembly of a dengue virus type 3 genome from a recent genotype III clade by metagenomic sequencing of serum.[Next Gen Genomics Facility (INT)]. Wellcome Open Res. 3:44.
Kuravadi NA, Yenagi V, Rangiah K, Mahesh HB, Rajamani A, Shirke MD, Russiachand H, Loganathan RMalarini, Lingu CShankara, Siddappa S et al..  2015.  Comprehensive analyses of genomes, transcriptomes and metabolites of neem tree. [Mass spectrometry - Metabolomics]. PeerJ. 3:e1066.
Hajirnis N, Pandey S, Mishra RK.  2023.  CRISPR/Cas9 and FLP-FRT mediated regulatory dissection of the BX-C of Drosophila melanogaster [Transgenic Fly Facility]. Chromosome Res. 31(1):7.
K. Shafi M, Joshi AG, Meenakshi I, Pasha SNaseer, Harini K., Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2020.  Dataset for the combined transcriptome assembly of M. oleifera and functional annotation [Next Gen Genomics Facility (INT)]. Data in Brief. :105416.
K. Shafi M, Joshi AG, Meenakshi I, Pasha SNaseer, Harini K., Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2020.  Dataset for the combined transcriptome assembly of M. oleifera and functional annotation [Next Gen Genomics Facility (INT)]. Data in Brief. :105416.
K. Shafi M, Joshi AG, Meenakshi I, Pasha SNaseer, Harini K., Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2020.  Dataset for the combined transcriptome assembly of M. oleifera and functional annotation [Next Gen Genomics Facility (INT)]. Data in Brief. :105416.
K. Shafi M, Joshi AG, Meenakshi I, Pasha SNaseer, Harini K., Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2020.  Dataset for the combined transcriptome assembly of M. oleifera and functional annotation [Next Gen Genomics Facility (INT)]. Data in Brief. :105416.
K. Shafi M, Joshi AG, Meenakshi I, Pasha SNaseer, Harini K., Mahita J, Sajeevan RSivarajan, Karpe SD, Ghosh P, Nitish S et al..  2020.  Dataset for the combined transcriptome assembly of M. oleifera and functional annotation [Next Gen Genomics Facility (INT)]. Data in Brief. :105416.
Neerathilingam M, Bairy SG, Mysore S.  2016.  Deciphering Mode of Action of Functionally Important Regions in the Intrinsically Disordered Paxillin (Residues 1-313) Using Its Interaction with FAT (Focal Adhesion Targeting Domain of Focal Adhesion Kinase). [Protein Technology Core]. PLoS One. 11(2):e0150153.
Kumar R, Mohammad A, Saini RV, Chahal A, Wong C-M, Sharma D, Kaur S, Kumar V, Winterbourn CC, Saini AK.  2019.  Deciphering the in vivo redox behavior of human peroxiredoxins I and II by expressing in budding yeast [Mass Spectrometry - Proteomics].. Free Radic Biol Med. 145:321-329.
Singh J, Sabareesan AT, Mathew MK, Udgaonkar JB.  2012.  Development of the structural core and of conformational heterogeneity during the conversion of oligomers of the mouse prion protein to worm-like amyloid fibrils.. J Mol Biol. 423(2):217-31.
Gupta S, Marcel N, Talwar S, Garg M, R I, Perumalsamy LR, Sarin A, Shivashankar GV.  2012.  Developmental heterogeneity in DNA packaging patterns influences T-cell activation and transmigration.. PLoS One. 7(9):e43718.
Mallik AKumar, N Achyuthan S, Ganesh SR, Pal SP, Vijayakumar SP, Shanker K.  2019.  Discovery of a deeply divergent new lineage of vine snake (Colubridae: Ahaetuliinae: Proahaetulla gen. nov.) from the southern Western Ghats of Peninsular India with a revised key for Ahaetuliinae [Next Gen Genomics Facility].. PLoS One. 14(7):e0218851.
Ghosh S, Kundu R, Chandana M, Das R, Anand A, Beura S, Bobde RChandrakan, Jain V, Prabhu SRamakant, Behera PKumari et al..  2023.  Distinct evolution of type I glutamine synthetase in Plasmodium and its species-specific requirement [Mass Spectrometry Facility - Metabolomics]. Nat Commun. 14(1):4216.
Perumalsamy LR, Marcel N, Kulkarni S, Radtke F, Sarin A.  2012.  Distinct spatial and molecular features of notch pathway assembly in regulatory T cells.. Sci Signal. 5(234):ra53.
Behring JB, Kumar V, Whelan SA, Chauhan P, Siwik DA, Costello CE, Colucci WS, Cohen RA, McComb ME, Bachschmid MM.  2014.  Does reversible cysteine oxidation link the Western diet to cardiac dysfunction? FASEB J. 28(5):1975-87.
Masurkar SArun, Deogharkar A, Bharambe HShrikrishn, Shirsat NVishwanath.  2021.  Downregulation of CRX, a Group 3-specific oncogenic transcription factor, inhibits TGF-β activin signaling in medulloblastoma cells [Genomics Facility]. Biochemical and Biophysical Research Communications. 568:76–82.

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