Publications

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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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Author Title [ Type(Asc)] Year
Journal Article
Narayanannair A, Nadiya F, Thomas J, Sabu K.  2017.  Discovery of MicroRNAs in Cardamom ( Elettaria cardamomum Maton) under Drought Stress. Dataset Papers in Science. 2017:1-4.
Mallik AKumar, N Achyuthan S, Ganesh SR, Pal SP, Vijayakumar SP, Shanker K.  2019.  Discovery of a deeply divergent new lineage of vine snake (Colubridae: Ahaetuliinae: Proahaetulla gen. nov.) from the southern Western Ghats of Peninsular India with a revised key for Ahaetuliinae [Next Gen Genomics Facility].. PLoS One. 14(7):e0218851.
Surendran H, Rajamoorthy M, Pal R.  2019.  Differentiating Human Induced Pluripotent Stem Cells (iPSCs) Into Lung Epithelial Cells. [Eyestem, a C-CAMP Startup]. Curr Protoc Stem Cell Biol. :e86.
Boya R, Yadavalli ADevi, Nikhat S, Kurukuti S, Palakodeti D, Pongubala JMR.  2017.  Developmentally regulated higher-order chromatin interactions orchestrate B cell fate commitment.. Nucleic Acids Res.
Gupta S, Marcel N, Talwar S, Garg M, R I, Perumalsamy LR, Sarin A, Shivashankar GV.  2012.  Developmental heterogeneity in DNA packaging patterns influences T-cell activation and transmigration.. PLoS One. 7(9):e43718.
Singh J, Sabareesan AT, Mathew MK, Udgaonkar JB.  2012.  Development of the structural core and of conformational heterogeneity during the conversion of oligomers of the mouse prion protein to worm-like amyloid fibrils.. J Mol Biol. 423(2):217-31.
Ghatak A, Bharatham N, Shanbhag AP, Datta S, Venkatraman J.  2017.  Delineating Substrate Diversity of Disparate Short-Chain Dehydrogenase Reductase from Debaryomyces hansenii.. PLoS One. 12(1):e0170202.
Krishna S, Nair A, Cheedipudi S, Poduval D, Dhawan J, Palakodeti D, Ghanekar Y.  2013.  Deep sequencing reveals unique small RNA repertoire that is regulated during head regeneration in Hydra magnipapillata. [Next Generation Genomics facility]. Nucleic Acids Res. 41(1):599-616.
Nadiya F, Anjali N, Thomas J, Gangaprasad A, Sabu KK.  2019.  Deep sequencing identified potential miRNAs involved in defence response, stress and plant growth characteristics of wild genotypes of cardamom [Next Gen Genomics Facility]. Plant Biol (Stuttg). 21(1):3-14.
Neerathilingam M, Bairy SG, Mysore S.  2016.  Deciphering Mode of Action of Functionally Important Regions in the Intrinsically Disordered Paxillin (Residues 1-313) Using Its Interaction with FAT (Focal Adhesion Targeting Domain of Focal Adhesion Kinase). [Protein Technology Core]. PLoS One. 11(2):e0150153.
Nadiya F, Anjali N, Thomas J, Gangaprasad A, Sabu KK.  2017.  Data on identification of conserved and novel miRNAs in Elettaria cardamomum [Next Gen Genomics Facility]. Data Brief. 14:789-792.
Rangiah K, Palakodeti D.  2013.  Comprehensive analysis of neurotransmitters from regenerating planarian extract using an ultrahigh-performance liquid chromatography/mass spectrometry/selected reaction monitoring method.. Rapid Commun Mass Spectrom. 27(21):2439-52.
Kuravadi NA, Yenagi V, Rangiah K, Mahesh HB, Rajamani A, Shirke MD, Russiachand H, Loganathan RMalarini, Lingu CShankara, Siddappa S et al..  2015.  Comprehensive analyses of genomes, transcriptomes and metabolites of neem tree. [Mass spectrometry - Metabolomics]. PeerJ. 3:e1066.
Dias M, Pattabiraman C, Siddappa S, Gowda M, Shet A, Smith D, Muehlemann B, Tamma K, Solomon T, Jones T et al..  2018.  Complete assembly of a dengue virus type 3 genome from a recent genotype III clade by metagenomic sequencing of serum.[Next Gen Genomics Facility]. Wellcome Open Res. 3:44.
Mukherjee AK, Bhagowati P, Biswa BBahadur, Chanda A, Kalita B.  2017.  A comparative intracellular proteomic profiling of Pseudomonas aeruginosa strain ASP-53 grown on pyrene or glucose as sole source of carbon and identification of some key enzymes of pyrene biodegradation pathway.. J Proteomics. 167:25-35.
Tuikhar N, Keisam S, Labala RKumar, Ramakrishnan P, Arunkumar MCha, Ahmed G, Biagi E, Jeyaram K.  2019.  Comparative analysis of the gut microbiota in centenarians and young adults shows a common signature across genotypically non-related populations [Mass Spectrometry - Metabolomics Facility].. Mech Ageing Dev. 179:23-35.
Khandelwal R, Sipani R, Rajan SGovinda, Kumar R, Joshi R.  2017.  Combinatorial action of Grainyhead, Extradenticle and Notch in regulating Hox mediated apoptosis in Drosophila larval CNS.. PLoS Genet. 13(10):e1007043.
Kumar V, A AKumar, Sanawar R, Jaleel A, Kumar TRSanthosh, Kartha CC.  2019.  Chronic Pressure Overload Results in Deficiency of Mitochondrial Membrane Transporter ABCB7 Which Contributes to Iron Overload, Mitochondrial Dysfunction, Metabolic Shift and Worsens Cardiac Function [Mass Spectrometry - Metabolomics Facility].. Sci Rep. 9(1):13170.
Jose RC, Bengyella L, Handique PJ, Talukdar NC.  2018.  Cellular and proteomic events associated with localized formation of smut-gall during Zizania latifolia-Ustilago esculenta interaction. [Mass Spectrometry - Proteomics Facility]. Microb Pathog.
Kumar R, Saha S, Sinha B.  2019.  Cell spread area and traction forces determine myosin-II-based cortex thickness regulation. [Central Imaging and Flow Cytometry Facility]. Biochim Biophys Acta Mol Cell Res.
Borah D, Nainamalai S, Gopalakrishnan S, Rout J, Alharbi NS, Alharbi SAli, Nooruddin T.  2018.  Biolubricant potential of exopolysaccharides from the cyanobacterium Cyanothece epiphytica. [Mass Spectrometry - Glycomics]. Appl Microbiol Biotechnol. 102(8):3635-3647.
Abramson J(C-CAMP), Vartanian AS.  2013.  Biochemistry. Watch water flow.. Science. 340(6138):1294-5.
Thakur R, Chattopadhyay P, Mukherjee AK.  2015.  Biochemical and pharmacological characterization of a toxic fraction and its cytotoxin-like component isolated from Russell's viper (Daboia russelii russelii) venom. (Mass Spectrometry). Comp Biochem Physiol C Toxicol Pharmacol. 168:55-65.
Purushothaman K, Bhat SKrishna, Singh SAnnapurna, Marathe GKedihithlu, Rao ARao GAppu.  2019.  Aspartic protease from Aspergillus niger: Molecular characterization and interaction with pepstatin A [Mass Spectrometry Facility - Proteomics].. Int J Biol Macromol.
Preethy CPaul, Padmapriya R, Periasamy VSubbarayan, Riyasdeen A, Srinag S, Krishnamurthy H, Alshatwi AAbdullah, Akbarsha MAbdulkader.  2012.  Antiproliferative property of n-hexane and chloroform extracts of Anisomeles malabarica (L). R. Br. in HPV16-positive human cervical cancer cells.. J Pharmacol Pharmacother. 3(1):26-34.

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