Publications

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Listed below are the Publications supported by Technology platforms at C-CAMP / Bangalore Life Science Cluster.

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Author Title Type [ Year(Desc)]
2013
Abramson J(C-CAMP), Vartanian AS.  2013.  Biochemistry. Watch water flow.. Science. 340(6138):1294-5.
Rangiah K, Palakodeti D.  2013.  Comprehensive analysis of neurotransmitters from regenerating planarian extract using an ultrahigh-performance liquid chromatography/mass spectrometry/selected reaction monitoring method.. Rapid Commun Mass Spectrom. 27(21):2439-52.
Krishna S, Nair A, Cheedipudi S, Poduval D, Dhawan J, Palakodeti D, Ghanekar Y.  2013.  Deep sequencing reveals unique small RNA repertoire that is regulated during head regeneration in Hydra magnipapillata. [Next Generation Genomics facility]. Nucleic Acids Res. 41(1):599-616.
Singh NKumar, Kumar S, Raghava GPal Singh, Mayilraj S.  2013.  Draft Genome Sequence of Acinetobacter baumannii Strain MSP4-16. (Next Generation Genomics). Genome Announc. 1(2):e0013713.
Kaur N, Kumar S, Bala M, Raghava GPal Singh, Mayilraj S.  2013.  Draft Genome Sequence of Amycolatopsis decaplanina Strain DSM 44594T. [Next Generation Genomics facility]. Genome Announc. 1(2):e0013813.
Bala M, Kumar S, Raghava GPal Singh, Mayilraj S.  2013.  Draft Genome Sequence of Rhodococcus qingshengii Strain BKS 20-40. (Next Generation Genomics). Genome Announc. 1(2):e0012813.
Bala M, Kumar S, Raghava GPal Singh, Mayilraj S.  2013.  Draft Genome Sequence of Rhodococcus ruber Strain BKS 20-38. [Next Generation Genomics facility]. Genome Announc. 1(2):e0013913.
Kumar S, Bala M, Raghava GPal Singh, Mayilraj S.  2013.  Draft Genome Sequence of Rhodococcus triatomae Strain BKS 15-14. [Next Generation Genomics facility]. Genome Announc. 1(2):e0012913.
Kumar S, Kaur N, Singh NKumar, Raghava GPal Singh, Mayilraj S.  2013.  Draft Genome Sequence of Streptomyces gancidicus Strain BKS 13-15. (Next Generation Genomics). Genome Announc. 1(2):e0015013.
Agrawal T, Sadaf S, Hasan G.  2013.  A genetic RNAi screen for IP₃/Ca²⁺ coupled GPCRs in Drosophila identifies the PdfR as a regulator of insect flight. [Drosophila facility]. PLoS Genet. 9(10):e1003849.
Prabhakara S, Khedkar S, Shambat SMairpady, Srinivasan R, Basu A, Norrby-Teglund A, Seshasayee ASai Narain, Arakere G.  2013.  Genome sequencing unveils a novel sea enterotoxin-carrying PVL phage in Staphylococcus aureus ST772 from India. [Next Generation Genomics facility]. PLoS One. 8(3):e60013.
Srinivasan R, Chandraprakash D, Krishnamurthi R, Singh P, Scolari VF, Krishna S, Seshasayee ASai Narain.  2013.  Genomic analysis reveals epistatic silencing of "expensive" genes in Escherichia coli K-12. [Next Generation Genomics facility]. Mol Biosyst. 9(8):2021-33.
Saha R, Verma PKumar, Rakshit S, Saha S, Mayor S, Pal SKumar.  2013.  Light driven ultrafast electron transfer in oxidative redding of Green Fluorescent Proteins. [Protein Technology Facility]. Sci Rep. 3:1580.
Thomas P, Reddy. KM.  2013.  Microscopic elucidation of abundant endophytic bacteria colonizing the cell wall–plasma membrane peri-space in the shoot-tip tissue of banana. Oxford Journal AoB PLANTS (2013) 5 : plt011.
Kumar V, Kleffmann T, Hampton MB, Cannell MB, Winterbourn CC.  2013.  Redox proteomics of thiol proteins in mouse heart during ischemia/reperfusion using ICAT reagents and mass spectrometry.. Free Radic Biol Med. 58:109-17.
Sekar N, Veetil SKariyadan, Neerathilingam M.  2013.  Tender coconut water an economical growth medium for the production of recombinant proteins in Escherichia coli. [Protein Technology Facility]. BMC Biotechnol. 13:70.
Mandal P, Verma N, Chauhan S, Tomar RS.  2013.  Unexpected histone H3 tail-clipping activity of glutamate dehydrogenase. (Mass spectrometry - Proteomics). J Biol Chem. 288(26):18743-57.
2014
Behring JB, Kumar V, Whelan SA, Chauhan P, Siwik DA, Costello CE, Colucci WS, Cohen RA, McComb ME, Bachschmid MM.  2014.  Does reversible cysteine oxidation link the Western diet to cardiac dysfunction? FASEB J. 28(5):1975-87.
Sen S, Cao D, Choudhary R, Biagini S, Wang JW, Reichert H, VijayRaghavan K.  2014.  Genetic transformation of structural and functional circuitry rewires the Drosophila brain. [Drosophila Facility]. Elife. 3
Babu P.  2014.  Glycans in regeneration.. ACS Chem Biol. 9(1):96-104.
Mukherjee AK, Dutta S, Mackessy SP.  2014.  A new C-type lectin (RVsnaclec) purified from venom of Daboia russelii russelii shows anticoagulant activity via inhibition of FXa and concentration-dependent differential response to platelets in a Ca²⁺-independent manner. (Mass spectrometry). Thromb Res. 134(5):1150-6.
Rangiah K.  2014.  Sensitive UHPLC-MS/SRM method for quantifying olanzapine metabolites and degradation products from sera. Anal. Methods. 6:5250-5257.
Neerathilingam M, Mysore S, Gandham SHari A.  2014.  Soni-removal of nucleic acids from inclusion bodies. [Protein Technology Core]. Biochem Biophys Res Commun. 448(1):45-9.
Gandham SHari A, Volk DE, Lokesh GLR, Neerathilingam M, Gorenstein DG.  2014.  Thioaptamers targeting dengue virus type-2 envelope protein domain III. [Protein Technology Core]. Biochem Biophys Res Commun. 453(3):309-15.
Mukherjee AK, Kalita B, Thakur R.  2014.  Two acidic, anticoagulant PLA2 isoenzymes purified from the venom of monocled cobra Naja kaouthia exhibit different potency to inhibit thrombin and factor Xa via phospholipids independent, non-enzymatic mechanism. (Mass Spectrometry - Proteomics). PLoS One. 9(8):e101334.

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